Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs79313350 chr17:80797605 G/T 7.51E-9 285 26.38 22.68 16.4 KM Plot
KIRP rs79356770 chr21:44316724 G/A 0.000157 287 25.57 43.53 13.07 KM Plot
KIRP rs79420677 chr10:43390864 A/C 5.62E-6 287 25.7 24.57 16.12 KM Plot
KIRP rs79471063 chr10:43117788 A/C 6.87E-5 289 25.57 27.47 11.43 KM Plot
KIRP rs79499199 chr17:80827157 A/T 2.77E-6 285 26.28 25.5 16.77 KM Plot
KIRP rs79517098 chr10:43544633 C/G 4.99E-5 287 25.63 25.7 11.43 KM Plot
KIRP rs79573759 chr10:124800463 C/T 2.1E-9 286 25.62 26.47 13.17 KM Plot
KIRP rs7967379 chr12:2355460 A/G 0 281 26.37 19.28 4.63 KM Plot
KIRP rs79690969 chr16:90076227 T/A 1.15E-7 287 23.6 34.97 10.7 KM Plot
KIRP rs79699519 chr13:28023241 C/T 3.26E-8 281 25.97 26.2 6.82 KM Plot
KIRP rs79742134 chr2:153345413 C/T 1.8E-7 286 25.62 26 10.7 KM Plot
KIRP rs7978597 chr12:6628148 T/C 3.48E-5 285 23.62 28.03 5.38 KM Plot
KIRP rs79866908 chr10:43499709 T/C 4.3E-5 289 25.67 25.95 11.43 KM Plot
KIRP rs79873247 chr10:94622388 A/C 9.48E-6 284 26.1 25.75 5.48 KM Plot
KIRP rs79904744 chr7:20669814 T/A 2.29E-5 288 25.82 22.57 11.2 KM Plot